Fractionation of distiller's grains into value added products may serve to improve the economic viability of dry grind corn ethanol facilities in the wake of variable corn and ethanol prices. This research is aimed at creating a high protein, high lysine product from the grain using alkaline protein extractions in conjunction with hydrolysis of the remaining fiber to sugars which are then fermented to ethanol. Alkaline extractions improved the lysine content in protein products, although protein solubility did not exceed 45% of the total protein. In addition, oligomeric carbohydrates, starch, and other water solubles were also extracted, leading to a low purity protein product. Resulting sugar yields following ammonia fiber expansion (AFEX) pretreatment were also lower for extracted distiller's grains. From these experiments, it does not appear likely that alkaline extraction is a useful tool for fractionation of distiller's grains. However, pretreatment and hydrolysis can be an effective tool for further fractionation of protein. (C) 2009 Elsevier Ltd. All rights reserved.