Fossil fuel resources are the main source for hydrogen production, and hydrogen production by renewable energy, such as biomass, is under development. To compare the performance in natural resource utilization for different hydrogen production systems, in this paper, two laboratorial hydrogen production systems from biomass and one industrial hydrogen production system from natural gas are analyzed by using industrial emergy evaluation indices. One of the laboratorial systems is a continuous supercritical water gasification system from glucose, and the other is a batch supercritical water gasification system from sawdust. The industrial system adopts American Brown technology. The evaluation results show that although the industrial emergy efficiency (IEE) of the industrial system from natural gas is higher than that of the laboratorial systems from biomass, the industrial emergy index of sustainability, (IEIS) of the two laboratorial systems are higher than that of the industrial system. To make the laboratorial biomass system become an industrial system, the system should improve its yield, and reduce its capital investment. (C) 2008 Elsevier Ltd. All rights reserved.