This paper describes the formulation of a quasi-1-D network model, referred to as the 'bubble model', and its application for simulating particle transport and filtration through a granular filter bed. The model comprises a series of homogeneous sites linked through bundles of cylindrical bonds that represent flow pathways through distributions of pores and pore throats. This model incorporates pore scale processes of particle sieving and infiltration are based on numerical simulations described in a companion paper. The modeling of infiltration is further refined based on detailed experimental observations and measurements of the filtration of a dilute suspension of acrylic particles through a column of glass beads reported by Yoon et al. (2005 Water Resour Res., to appear). Their data distinguish (a) between the collection of particles on grain surfaces and at grain-to-grain contact points, and (b) between particles that are fully entrapped and those that are hindered (temporarily collected) and can later become detached. These effects are represented by two parameters that characterize the probability of attachment and are linked to the surface roughness of the grains; one that describes the minimum particle size that can be fully entrapped, and one that describes the detachment rate. These parameters can be readily calibrated from conventional measurements of effluent concentration and effluent particle size distribution. Detailed comparisons with the data reported by Yoon et al. show that the proposed bubble model is able to achieve reliable predictions of the spatial distribution of particles within the filter bed following phases of particle injection and washing.