Biochemical and Biophysical Research Communications, Vol.372, No.4, 589-594, 2008
Modular assembly of chimeric phi29 packaging RNAs that support DNA packaging
The bacteriophage phi29 DNA packaging motor is a protein/RNA complex that can produce strong force to condense the linear-double-stranded DNA genome into a pre-formed protein capsid. The RNA component, called the packaging RNA (pRNA), utilizes magnesium-dependent inter-molecular base-pairing interactions to form ring-shaped complexes. The pRNA is a class of non-coding RNA, interacting with phi29 motor proteins to enable DNA packaging. Here, we report a two-piece chimeric pRNA construct that is fully competent in interacting with partner pRNA to form ring-shaped complexes, in packaging DNA via the motor, and in assembling infectious phi29 virions in vitro. This is the first example of a fully functional pRNA assembled using two non-covalently interacting fragments. The results support the notion of modular pRNA architecture in the phi29 packaging motor. (C) 2008 Elsevier Inc. All rights reserved.
Keywords:packaging RNA;packaging motor;DNA packaging;bacteriophage;phi29;RNA assembly;non-coding RNA