Journal of Physical Chemistry B, Vol.112, No.19, 6214-6220, 2008
Concentration effects in "Single-Molecule" spectroscopy
A concentration as low as 0. 1 molecule per observation volume may not be small enough for single-molecule Forster resonance energy transfer (FRET) efficiency measurements of molecules diffusing through a laser spot. This result follows from a rigorous theory that takes many molecules into account. We consider the distributions of the number of photons (photon counting histograms) and show that multiple-molecule effects are pronounced at large photon counts even at low concentrations. FRET efficiency distributions reveal multiple-molecule effects at large threshold values. This might be misinterpreted as multiple conformational states. Multiple-molecule effects strongly depend on the brightness of fluorophores. A simple test is suggested to determine parameters for which the single-molecule description is applicable.