ACN is an extremely poor hydrogen bond donor and therefore the anions dissolved in it are Revised May 4, 2007 solvated mainly by other hydrogen bond donors (e.g. uncharged acids) possibly present in Accepted May 4,2007 the solution. Under properly selected experimental conditions stabilization via hydrogen bonding can be used for separation in CE as has been demonstrated for uncharged acids by several authors. Electromigration based on heteroconjugation can be of importance, e.g. when aqueous separation medium cannot be used due to stability reasons. It also allows CE to be used as a tool for solution chemistry measurements, if the required physicochemical properties of the studied system are known or they can be predicted with sufficient accuracy by existing theories. In the present work we showed that also an uncharged base can stabilize an anion via hydrogen bonding in ACN. In the setup imidazole was chosen as a model base and acetate ion as complexing anion in equimolar acetic acid-acetate buffer. The resulted hydrogen-bonded imidazole-acetate complex (i.e. heteroconjugate) possesses a charge and can thus migrate in CE. It was shown that the studied complexation in ACN is sensitive to competition by other hydrogen bond donors such as water and methanol. On the other hand, acetone, which is a poor hydrogen bond donor, did not have much effect on the complexation. To take the effect of ionic strength on mobility into account, mobilities of the imidazole-acetate complex measured at various ionic strengths were corrected to zero ionic strength by the aid of conductivity equation. A fit of the 1:1 binding isotherm to the ionic strength corrected mobility versus acetate concentration data led to rather good correlation. However, x-reciprocal linear transformation of the binding isotherm showed nonlinearity which could be partly explained by homoconjugation of acetic acid and acetate ion. Since the homoconjugation constant for acetic acid under present experimental conditions was not available, theoretical simulations were used to demonstrate the effects of homoconjugation. The possibility of multiple complexation of imidazole was discussed as well.