In this article, we report the pure three-photon absorption effects of two novel symmetrical fluorene-based molecules with 2D-pi-2D [9,9-diethylhexyl-2,7-bis-(N,N-diphenylamine)fluorene] and 213-D-pi-D-213 [5,5'-(9,9-bis-(2-ethylhexyl)-9H-fluorene-2-yl)bis(N,N-diphenylthiophen-2-amine)] structural motifs. The obtained three-photon absorption cross sections, (4.74 +/- 0.01) x 10(-76) and (6.77 +/- 0.02) x 10(-76) cm(6) s(2) for the 213-pi-21) and 2D-D-pi-D-2D archetypes, respectively, are rather high. The geometries and electronic excitations of the two molecules were systematically studied by the PM3 and ZINDO/S methods. The influence of the different molecular structures on the three-photon absorption cross section is discussed micromechanically. The experimental and theoretical results demonstrate that the transition dipole moment between the ground and final states is the most definitive factor. A new fitting method that is more accurate than those reported previously was used to obtain the 3PA coefficient.