Macromolecules, Vol.28, No.24, 8242-8246, 1995
Sequential Hydrophobic Polypeptides Consisting of Leucine and Isoleucine - Synthesis, Conformational Characterization in the Solid-State, and Governing Factors for the Specification in the Beta-Structure Alpha-Helix Decision
Six new sequential hydrophobic polypeptides consisting of leucyl and isoleucyl residues were synthesized by polycondensation of peptide active esters. Solid samples of these polypeptides were obtained by fast reprecipitation from a solution in 1,1,1,3,3,3-hexafluoropropan-2-ol (HFIP) or HFIP/dichloroacetic acid with diethyl ether. The conformation of the solid sample was determined by IR spectroscopy as follows : the beta-structure for (Leu-Ile-Ile-Leu)(n), a mixture of the beta-structure and alpha-helix for (Leu-Ile-Leu)(n), and the alpha-helix for (Ala-Ile-Ile-Leu)(n), (D-Leu-Ile-Ile-Leu)(n), (Leu-Ile-Ile-Gly)(n), and (Leu-Ile-Ile-Aib)(n). The factor governing the specification of the beta-structure/alpha-helix was deduced to be the consecutiveness of the tidily aligned hydrophobic side chains of the amino acid residues to afford sterically well-regulated intermolecular aggregation of the polypeptides prior to the conformational preference of the individual amino acid residue.