Magnetic field (MF) can interact with the metabolism of microalgae and has an effect (positive or negative) on the synthesis of molecules. In addition to MF, the use of pentose as a carbon source for cultivating microalgae is an alternative to increase carbohydrate yield. This study aimed at evaluating the MF application on the mixotrophic culture ofChlorella minutissimain order to produce carbohydrates. MF of 30 mT was generated by ferrite magnets and applied diurnally for 12 days. The addition of 5% pentose, MF application of 30 mT, and nitrogen concentration reduced (1.25 mM of KNO3) was the best conditions to obtain higher carbohydrate concentrations. MF application of 30 mT increased biomass and carbohydrate contents in 30% and 163.1%, respectively, when compared with the assay without MF application. The carbohydrate produced can be used for bioethanol production.