Journal of the American Chemical Society, Vol.117, No.3, 1083-1089, 1995
Conformational Behavior and Magnetic-Properties of Organic Radicals Derived from Amino-Acid-Residues - The Dipeptide Analog of Glycine Radical
A general quantum mechanical protocol for the study of flexible open-shell systems has been applied to a simple model of the glycine radical engaged in peptide chains. The conformational freedom of the resulting dipeptide; analogue is severely restricted with respect to that of standard amino acid residues. Only planar or quasi-planar conformations are energetically accessible due to pi-electron delocalization on the whole compound. As a consequence, the structural parameters and the vibrational frequencies involving the C-alpha atom are typical of ethylenic systems. The hyperfine coupling constants of the (CH)-H-alpha moiety remain, however, similar to those of the prototype methyl radical and show the same strong dependence on out-of-plane deformations. The hyperfine coupling constants of the NH moiety are, instead, only dependent on the backbone conformation. Vibrationally averaged hyperfine coupling constants both of (CH)-H-alpha and NH moieties are in fair agreement with experimental values of glycine radicals produced in some proteins.
Keywords:HYPERFINE COUPLING-CONSTANTS;ELECTRON-SPIN-RESONANCE;RIBONUCLEOTIDE REDUCTASE;MANY-BODY;PARAMETERS;ABINITIO;SPECTROSCOPY;PEPTIDES;SPECTRUM;DENSITY