Journal of the American Chemical Society, Vol.116, No.24, 10914-10920, 1994
Effect of Phosphate Activating Group on Oligonucleotide Formation on Montmorillonite - The Regioselective Formation of 3’,5’-Linked Oligoadenylates
The effects of amine structure on the montmorillonite-catalyzed oligomerization of the 5’-phosphoramidates of adenosine are investigated. 4-Aminopyridine derivatives yielded oligoadenylates as long as dodecamers with a regioselectivity for 3’,5’-phosphodiester bond formation averaging 88%. Linear and cyclic oligomers are obtained and no A(5’)ppA-containing products are detected. Oligomers as long as the hexanucleotide are obtained using 2-aminobenzimidazole as the activating group. A predominance of pA(2’)pA is detected in the dimer fraction along with cyclic 3’,5’-trimer; no A(5’)ppA-containing oligomers were detected. Little or no oligomer formation was observed when morpholine, piperidine, pyrazole, 1,2,4-triazole, and 2-pyridone are used as phosphate-activating groups. The effects of the structure of the phosphate activating group on the oligomer structure and chain lengths are discussed.
Keywords:TEMPLATE-DIRECTED SYNTHESIS;OLIGOMERIZATION REACTIONS;ACYLATION CATALYSTS;PREBIOTIC SYNTHESIS;AQUEOUS-SOLUTION;HYDROLYSIS;5’-PHOSPHORIMIDAZOLIDE;RIBONUCLEOTIDES;RNA;POLYNUCLEOTIDES