This study offers an efficient method to improve manufacturing technique of metallic bipolar plates (BPPs) so as to simultaneously reduce contact resistance (CR) and maximize power density in proton exchange membrane fuel cell (PEMFC). CR plays an important role in the energy conversion in the cell and can be normally reduced by coating on the BPP surface. Nevertheless, the effect of fabrication process on the CR has not been revealed, especially for the welding and forming characteristics. In this paper, a comprehensive three-dimensional finite element model of BPP/gas diffusion layer (GDL) assembly was established to investigate the influences of coating, weld and dimensional error on the CR, which are produced during the fabrication process of metallic BPPs. Experiments were carried out to validate the accuracy of the model. The results indicate that direction and distribution of the current in the cell change significantly with altering the weld path of metallic BPPs, which are different from graphite BPPs. 47% CR reduction is observed for the case of dense weld arrangement. For the coating process, it is found that the necessity of coating on both sides of single BPP is quite low if channel number is less than 20. Statistic simulation was conducted to investigate the effect of dimensional error on CR. Specially, 14.5% increment in CR is found when the dimensional error exceeds 30 pm. The methodology developed is beneficial to the fabrication management of metallic BPPs and the efficiency improvement of PEMFC.