A series of flexible, highly bright fluorescent poly(p-phenyleneethynylene)s (PPEs) was prepared by employing a disulfide containing nonconjugated monomer at various ratios under Sonogashira reaction conditions. PPEs with flexible linkers exhibited fluorescence properties comparable to those of a fully conjugated PPE when less than 50% of flexible monomers were incorporated into the backbone. To evaluate the self-assembly properties of PPEs, a series of conjugated polymer nanoparticles (CPNs) was fabricated by treating PPEs with organic acids followed by dialysis. CPNs containing linkers exhibited different complexation behavior with polysaccharides, warranting further investigation into how flexibility and biodegradability of CPNs influence their cellular interaction and entry. (c) 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2015, 53, 1403-1412