The goal of this study was to evaluate suitability of using mobile metallic temperature sensors in continuous microwave assisted sterilization (MATS) systems. A computer simulation model using the finite difference time domain method was developed to study the influence of microwave field on the accuracy of mobile metallic temperature sensors, ELLAB, in a MATS system in which food packages with embedded sensors traveled on a conveyor belt. Simulation results indicated that the metallic temperature sensors did not change the overall heating patterns within food samples. But when a metallic temperature sensor was placed in parallel to the electric field component within microwave cavities the field intensity had intense singularity at the sensor tip and caused localized overheating. The electric field singularity adjacent to the tip of the metallic temperature sensor can be avoided by placing the sensor perpendicular to the electric field component. The simulated heating patterns and temperature profiles were verified with experimental results. It was evident from both simulated and experimental results that the metallic temperature sensor could be used to capture temperature profile in a MATS system when placed in a suitable orientation. (C) 2013 Elsevier Ltd. All rights reserved.