Perforated gas diffusion layers (GDLs) of polymer electrolyte membrane fuel cells (PEMFCs) were investigated by means of in-situ synchrotron X-ray radiography during operation. We found a strong influence of perforations on the water distribution and transport in the investigated Toray TGP-H-090 GDL. The water occurs mainly around the perforations, while the holes themselves show varying water distributions. Some remain dry, while most of them fill up with liquid water after a certain period or might serve as drainage volume for effective water transport. Copyright (C) 2012, Hydrogen Energy Publications, LLC. Published by Elsevier Ltd. All rights reserved.