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Optimization of Yarrowia lipolytica-based consolidated biocatalyst through synthetic biology approach: transcription units and signal peptides shuffling Celinska E, Borkowska M, Korpys-Wozniak P, Kubiak M, Nicaud JM, Kubiak P, Gorczyca M, Bialas W Applied Microbiology and Biotechnology, 104(13), 5845, 2020 |
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In silico strategies to couple production of bioethanol with growth in cyanobacteria Testa RL, Delpino C, Estrada V, Diaz SM Biotechnology and Bioengineering, 116(8), 2061, 2019 |
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Transcriptomics-based strain optimization tool for designing secondary metabolite overproducing strains of Streptomyces coelicolor Kim M, Yi JS, Lakshmanan M, Lee DY, Kim BG Biotechnology and Bioengineering, 113(3), 651, 2016 |
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Bilevel optimization techniques in computational strain design Chowdhury A, Zomorrodi AR, Maranas CD Computers & Chemical Engineering, 72, 363, 2015 |
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Systems Metabolic Engineering Design: Fatty Acid Production as an Emerging Case Study Tee TW, Chowdhury A, Maranas CD, Shanks JV Biotechnology and Bioengineering, 111(5), 849, 2014 |
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Constraint-Based Modeling of Heterologous Pathways: Application and Experimental Demonstration for Overproduction of Fatty Acids in Escherichia coli Ip K, Donoghue N, Kim MK, Lun DS Biotechnology and Bioengineering, 111(10), 2056, 2014 |
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Elucidating and reprogramming Escherichia coli metabolisms for obligate anaerobic n-butanol and isobutanol production Trinh CT Applied Microbiology and Biotechnology, 95(4), 1083, 2012 |
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Elementary mode analysis: a useful metabolic pathway analysis tool for characterizing cellular metabolism Trinh CT, Wlaschin A, Srienc F Applied Microbiology and Biotechnology, 81(5), 813, 2009 |
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Optimization of fermentation medium composition in substrate-controlled continuous stirred tank reactors Beste H, Fackeldey M, Willems M, Stockmann L, WeusterBotz D Chemical Engineering & Technology, 20(6), 403, 1997 |
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Effects of Medium Composition on Hirudin Production in Recombinant Saccharomyces-Cerevisiae Choi CM, Kim MD, Rhee SK, Seo JH Biotechnology Letters, 18(10), 1129, 1996 |