| 1 |
Generating Intrinsically Disordered Protein Conformational Ensembles from a Database of Ramachandran Space Pair Residue Probabilities Using a Markov Chain
Cukier RI
Journal of Physical Chemistry B, 122(39), 9087, 2018 |
| 2 |
Molecular Dynamics of Oxazole Yellow Dye in its Ground and First Excited Electronic States in Solution and when Intercalated in dsDNA
Jin C, Cerutti D, Cukier RI
Journal of Physical Chemistry B, 121(44), 10242, 2017 |
| 3 |
Conformational Transition in Signal Transduction: Metastable States and Transition Pathways in the Activation of a Signaling Protein
Banerjee R, Yan HG, Cukier RI
Journal of Physical Chemistry B, 119(22), 6591, 2015 |
| 4 |
Dihedral Angle Entropy Measures for Intrinsically Disordered Proteins
Cukier RI
Journal of Physical Chemistry B, 119(9), 3621, 2015 |
| 5 |
Transition Paths of Met-Enkephalin from Markov State Modeling of a Molecular Dynamics Trajectory
Banerjee R, Cukier RI
Journal of Physical Chemistry B, 118(11), 2883, 2014 |
| 6 |
Conformational Transition of Response Regulator RR468 in a Two-Component System Signal Transduction Process
Banerjee R, Yan HG, Cukier RI
Journal of Physical Chemistry B, 118(18), 4727, 2014 |
| 7 |
Simulations of Potentials of Mean Force for Separating a Leucine Zipper Dimer and the Basic Region of a Basic Region Leucine Zipper Dimer
Cukier RI
Journal of Physical Chemistry B, 118(35), 10341, 2014 |
| 8 |
Computational Simulation Strategies for Analysis of Multisubunit RNA Polymerases
Wang BB, Feig M, Cukier RI, Burton ZF
Chemical Reviews, 113(11), 8546, 2013 |
| 9 |
Variance of a Potential of Mean Force Obtained Using the Weighted Histogram Analysis Method
Cukier RI
Journal of Physical Chemistry B, 117(47), 14785, 2013 |
| 10 |
Exploration of the Biological Micro-Surrounding Effect on the Excited States of the Size-Expanded Fluorescent Base x-Cytosine in DNA
Zhang LB, Chen XH, Liu HY, Han L, Cukier RI, Bu YX
Journal of Physical Chemistry B, 114(10), 3726, 2010 |
