화학공학소재연구정보센터
학회 한국화학공학회
학술대회 2007년 봄 (04/19 ~ 04/20, 울산 롯데호텔)
권호 13권 1호, p.104
발표분야 공정시스템
제목 가중치를 가진 조절네트워크의 영향을 받는 Escherichia coli의 제약조건 대사모델
초록 As the abundant experimental data on gene function and regulatory interactions have been accumulated in the field of molecular biology due to recent advances in high-throughput technology many data-driven approaches have become necessary to uncover functional inference and genetic regulatory networks from the large data sets. Though the traditional flux balance analysis has successfully predicted intracellular fluxes using stoichiometry, linear programming, and metabolic pathways, it has not automatically reflected any potential genetic effects in response to the environmental changes in the metabolic pathways. Thus in order to overcome the difficulties of the binary system, weight-added regulatory networks were devised so that the influence of sensors/regulators on target genes could be represented more flexibly. The weight-added regulatory networks consisting of many weight-added sub-networks were developed and incorporated into the FBA to remove inappropriate metabolic reactions generated by inconsistent regulatory events and to generate the dynamic level of expression of genes under the given conditions.
저자 황희태, 정승배, 황규석
소속 부산대
키워드 Flux balance analysis; Linear programming; If-Then rule; weight-added regulatory networks; Central metabolic pathway
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